Protein ZmHB98 | |
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Information | |
TF Name: | ZmHB98 |
Species: | Maize |
TF Family: | Homeobox |
Gene Name(Synonym): | HB98 |
Uniprot ID: | A0A1D6PDQ1 |
ZmHB98 is a protein in the Homeobox family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.
Overview of domains present in v5 transcripts | ||
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PF00046 | PF02183 | |
Zm00001eb223300_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d014201 | DAPseq | sequence | fimo | position | |
Zm00001d014201 | DAPseq | sequence | fimo | position | |
Zm00001d014201 | ChIPseq | sequence | fimo | position | |
Zm00001d014201 | PChIPseq | sequence | fimo | position |
MKPMATNGMAPSFFAANFLLQMQQEQQAHHQHQHHEGHDHLLAPPPPALVSPFLHDFGGAMTAPPPPMLATGIKRMYPDG
MCDDGSGHLHAEPKQHQQDCGGGASDDEEGSAAAACGERKRRLSVEQVRTLERSFEVANKLEPERKAQLARALGLQPRQV
AIWFQNRRARWKTKQLEKDYDALRRQLDAARAENDALLSHNKKLQTEIMALKGGGGGRQEAASELINLNVKETEASCSNR
SSDENSSEINLDISRPPRAADESPAAMDSYRGIPFYACARADDVDQLQLLHSGGHPSPAPKMEPGHGAAATAGGGGGGGG
TFGSLLCGAAADEQPPFWPWADGHHAFQ
MKPMATNGMAPSFFAANFLLQMQQEQQAHHQHQHHEGHDHLLAPPPPALVSPFLHDFGGAMTAPPPPMLATGIKRMYPDG
MCDDGSGHLHAEPKQHQQDCGGGASDDEEGSAAAACGERKRRLSVEQVRTLERSFEVANKLEPERKAQLARALGLQPRQV
AIWFQNRRARWKTKQLEKDYDALRRQLDAARAENDALLSHNKKLQTEIMALKGGGGGRQEAASELINLNVKETEASCSNR
SSDENSSEINLDISRPPRAADESPAAMDSYRGIPFYACARADDVDQLQLLHSGGHPSPAPKMEPGHGAAATAGGGGGGGG
TFGSLLCGAAADEQPPFWPWADGHHAFQ
MKPMATNGMAPSFFAANFLLQMQQEQQAHHQHQHHEGHDHLLAPPPPALVSPFLHDFGGAMTAPPPPMLATGIKRMYPDG
MCDDGSGHLHAEPKQHQQDCGGGASDDEEGSAAAACGERKRRLSVEQVRTLERSFEVANKLEPERKAQLARALGLQPRQV
AIWFQNRRARWKTKQLEKDYDALRRQLDAARAENDALLSHNKKLQTEIMALKGGGGGRQEAASELINLNVKETEASCSNR
SSDENSSEINLDISRPPRAADESPAAMDSYRGIPFYACARADDVDQLQLLHSGGHPSPAPKMEPGHGAAATAGGGGGGGG
TFGSLLCGAAADEQPPFWPWADGHHAFQ
MKPMATNGMAPSFFAANFLLQMQQEQQAHHQHQHHEGHDHLLAPPPPALVSPFLHDFGGAMTAPPPPMLATGIKRMYPDG
MCDDGSGHLHAEPKQHQQDCGGGASDDEEGSAAAACGERKRRLSVEQVRTLERSFEVANKLEPERKAQLARALGLQPRQV
AIWFQNRRARWKTKQLEKDYDALRRQLDAARAENDALLSHNKKLQTEIMALKGGGGGRQEAASELINLNVKETEASCSNR
SSDENSSEINLDISRPPRAADESPAAMDSYRGIPFYACARADDVDQLQLLHSGGHPSPAPKMEPGHGAAATAGGGGGGGG
TFGSLLCGAAADEQPPFWPWADGHHAFQ
MKPMATNGMAPSFFAANFLLQMQQEQQAHHQHQHHEGHDHLLAPPPPALVSPFLHDFGGAMTAPPPPMLATGIKRMYPDG
MCDDGSGHLHAEPKQHQQDCGGGASDDEEGSAAAACGERKRRLSVEQVRTLERSFEVANKLEPERKAQLARALGLQPRQV
AIWFQNRRARWKTKQLEKDYDALRRQLDAARAENDALLSHNKKLQTEIMALKGGGGGRQEAASELINLNVKETEASCSNR
SSDENSSEINLDISRPPRAADESPAAMDSYRGIPFYACARADDVDQLQLLHSGGHPSPAPKMEPGHGAAATAGGGGGGGG
TFGSLLCGAAADEQPPFWPWADGHHAFQ
MKPMATNGMAPSFFAANFLLQMQQEQQAHHQHQHHEGHDHLLAPPPPALVSPFLHDFGGAMTAPPPPMLATGIKRMYPDG
MCDDGSGHLHAEPKQHQQDCGGGASDDEEGSAAAACGERKRRLSVEQVRTLERSFEVANKLEPERKAQLARALGLQPRQV
AIWFQNRRARWKTKQLEKDYDALRRQLDAARAENDALLSHNKKLQTEIMALKGGGGGRQEAASELINLNVKETEASCSNR
SSDENSSEINLDISRPPRAADESPAAMDSYRGIPFYACARADDVDQLQLLHSGGHPSPAPKMEPGHGAAATAGGGGGGGG
TFGSLLCGAAADEQPPFWPWADGHHAFQ
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
---|---|
PF00046 |
|
PF02183 |
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Hover here to show all domains |
TTATATTAGCAGCTCCCGGACTCTT...
TTATATTAGCAGCTCCCGGACTCTTTCAGTTTCTTCCAGCTCTGCCTCTCTGTCACACACACACAAGACTCTCGCTAGCTCCCAAGTCCCAACCAACCTCTAGCAGCTCCATCCCCTCTCTCTCTCTTTCCCCGTGTCAATCTGTGGTGTGGGAAGGAAGATCGATATACTCCCTCCCCATGTTCCTCTCGCTCCTGCGATGAAGCCAATGGCAACCAATGGCATGGCCCCCTCCTTCTTCGCCGCCAACTTCCTCCTCCAAATGCAGCAGGAGCAGCAGGCGCACCACCAGCACCAGCACCATGAGGGCCACGACCACCTCCTGGCTCCCCCTCCCCCGGCGCTCGTCAGCCCCTTCCTCCACGACTTCGGCGGCGCCATGACCGCGCCGCCGCCTCCAATGCTGGCCACCGGCATTAAGCGCATGTACCCTGACGGCATGTGTGACGACGGCAGCGGCCACCTGCACGCGGAGCCCAAGCAGCACCAGCAGGACTGCGGCGGCGGCGCGTCGGACGACGAGGAGGGGTCCGCCGCGGCGGCGTGCGGCGAGCGGAAGCGGCGGCTGAGCGTGGAGCAGGTGCGCACGCTGGAGCGCAGCTTCGAGGTGGCCAACAAGCTGGAGCCGGAGCGCAAGGCGCAGCTGGCCCGCGCGCTGGGGCTGCAGCCCCGCCAGGTGGCCATCTGGTTCCAGAACCGCCGCGCCCGGTGGAAGACCAAGCAGCTGGAGAAGGACTACGACGCGCTGCGCCGCCAGCTGGACGCCGCCCGCGCCGAGAACGACGCCCTCCTCTCCCACAACAAGAAGCTCCAGACAGAGATCATGGCGCTCAAGGGAGGCGGAGGAGGGAGGCAGGAGGCGGCGTCGGAGCTCATCAACCTCAACGTCAAGGAGACGGAGGCGTCCTGCAGCAACCGCAGCAGCGACGAGAACAGCTCCGAGATCAACCTCGACATCTCCAGGCCGCCTCGGGCCGCCGACGAGAGCCCCGCCGCCATGGACAGCTACCGCGGCATCCCGTTCTACGCCTGCGCCCGCGCCGACGACGTCGACCAGCTCCAGCTCCTGCACAGCGGCGGCCACCCGTCCCCGGCGCCCAAGATGGAGCCCGGCCACGGCGCCGCCGCTACTGCGGGCGGTGGCGGAGGCGGAGGCGGCACCTTTGGAAGCCTGCTGTGCGGTGCCGCCGCCGACGAGCAGCCTCCGTTCTGGCCGTGGGCCGACGGCCACCACGCCTTCCAGTGAACAAATTAATCCTTCAATTCGTCTCGTACGGTGCACTACGCTGCCTGCTATGACCTCGCATCGGGCGACGCAGATTTTGTTCCATGGATCCAACAGCACGTCGACCGACCGACATGCCTCTCCGGCCGGTCATTTCCTCTTGGCATCGCATCAAGCTATGCGCCAGATCGCGAGATCGCCGCCGACGACGTACGTTGCCGATGCGTTGTTGATCAAAGAAGCAGCTGGGATATGTGAGGTGGTGAGACGATCCAATCAGGACGTACGGAGATGATGGATATGTCAGTCAAGGTAGATTGAGGAGTTGAGCAGTAAGTCTCTCTCTGTCTTTTTCTATTATCTCCATCCTTCTTGCCTTCTTCTTGGACATCTGTTTAACTATCTTCGTTCTCGAATATTTGTCGTTCTAGTTCAGTTTTGAACTAAAACACGACAAATAAAAAAGAACGAATGAAGTATATTATATATAGGTGATTACATTTGTGAGGCAGTGGTGATATTGTTGTGTATAGGATTATACTATATAATATGGTTATGGTACCATGTGAGTGCCAGGTTATTTCGTCCGCACTTGAACCTTGCAAATTCTACCTCTTATTTTTCTGCTTTTCTTTTACTCGT
MKPMATNGMAPSFFAANFLLQMQQEQQAHHQHQHHEGHDHLLAPPPPALVSPFLHDFGGAMTAPPPPMLATGIKRMYPDG
MCDDGSGHLHAEPKQHQQDCGGGASDDEEGSAAAACGERKRRLSVEQVRTLERSFEVANKLEPERKAQLARALGLQPRQV
AIWFQNRRARWKTKQLEKDYDALRRQLDAARAENDALLSHNKKLQTEIMALKGGGGGRQEAASELINLNVKETEASCSNR
SSDENSSEINLDISRPPRAADESPAAMDSYRGIPFYACARADDVDQLQLLHSGGHPSPAPKMEPGHGAAATAGGGGGGGG
TFGSLLCGAAADEQPPFWPWADGHHAFQ
CACACACACACAAGACTCTCGCTAG...
CACACACACACAAGACTCTCGCTAGCTCCCAAGTCCCAACCAACCTCTAGCAGCTCCATCCCCTCTCTCTCTCTTTCCCCGTGTCAATCTGTGGTGTGGGAAGGAAGATCGATATACTCCCTCCCCATGTTCCTCTCGCTCCTGCGATGAAGCCAATGGCAACCAATGGCATGGCCCCCTCCTTCTTCGCCGCCAACTTCCTCCTCCAAATGCAGCAGGAGCAGCAGGCGCACCACCAGCACCAGCACCATGAGGGCCACGACCACCTCCTGGCTCCCCCTCCCCCGGCGCTCGTCAGCCCCTTCCTCCACGACTTCGGCGGCGCCATGACCGCGCCGCCGCCTCCAATGCTGGCCACCGGCATTAAGCGCATGTACCCTGACGGCATGTGTGACGACGGCAGCGGCCACCTGCACGCGGAGCCCAAGCAGCACCAGCAGGACTGCGGCGGCGGCGCGTCGGACGACGAGGAGGGGTCCGCCGCGGCGGCGTGCGGCGAGCGGAAGCGGCGGCTGAGCGTGGAGCAGGTGCGCACGCTGGAGCGCAGCTTCGAGGTGGCCAACAAGCTGGAGCCGGAGCGCAAGGCGCAGCTGGCCCGCGCGCTGGGGCTGCAGCCCCGCCAGGTGGCCATCTGGTTCCAGAACCGCCGCGCCCGGTGGAAGACCAAGCAGCTGGAGAAGGACTACGACGCGCTGCGCCGCCAGCTGGACGCCGCCCGCGCCGAGAACGACGCCCTCCTCTCCCACAACAAGAAGCTCCAGACAGAGATCATGGCGCTCAAGGGAGGCGGAGGAGGGAGGCAGGAGGCGGCGTCGGAGCTCATCAACCTCAACGTCAAGGAGACGGAGGCGTCCTGCAGCAACCGCAGCAGCGACGAGAACAGCTCCGAGATCAACCTCGACATCTCCAGGCCGCCTCGGGCCGCCGACGAGAGCCCCGCCGCCATGGACAGCTACCGCGGCATCCCGTTCTACGCCTGCGCCCGCGCCGACGACGTCGACCAGCTCCAGCTCCTGCACAGCGGCGGCCACCCGTCCCCGGCGCCCAAGATGGAGCCCGGCCACGGCGCCGCCGCTACTGCGGGCGGTGGCGGAGGCGGAGGCGGCACCTTTGGAAGCCTGCTGTGCGGTGCCGCCGCCGACGAGCAGCCTCCGTTCTGGCCGTGGGCCGACGGCCACCACGCCTTCCAGTGAACAAATTAATCCTTCAATTCGTCTCGTACGGTGCACTACGCTGCCTGCTATGACCTCGCATCGGGCGACGCAGATTTTGTTCCATGGATCCAACAGCACGTCGACCGACCGACATGCCTCTCCGGCCGGTCATTTCCTCTTGGCATCGCATCAAGCTATGCGCCAGATCGCGAGATCGCCGCCGACGACGTACGTTGCCGATGCGTTGTTGATCAAAGAAGCAGCTGGGATATGTGAGGTGGTGAGACGATCCAATCAGGACGTACGGAGATGATGGATATGTCAGTCAAGGTAGATTGAGGAGTTGAGCAGTAAGTCTCTCTCTGTCTTTTTCTATTATCTCCATCCTTCTTGCCTTCTTCTTGGACATCTGTTTAACTATCTTCGTTCTCGAATATTTGTCGTTCTAGTTCAGTTTTGAACTAAAACACGACAAATAAAAAAGAACGAATGAAGTATATTATATATAGGTGATTACATTTGTGAGGCAGTGGTGATATTGTTGTGTATAGGATTATACTATATAATATGGTTATGGTACCATGTGAGTGCCAGGTTATTTCGTCCGCACTTGAACCTTGCAAATTCTACCTCTTATTTTTCTGCTTTTCTTTTACTCGT
MALKGGGGGRQEAASELINLNVKETEASCSNRSSDENSSEINLDISRPPRAADESPAAMDSYRGIPFYACARADDVDQLQ
LLHSGGHPSPAPKMEPGHGAAATAGGGGGGGGTFGSLLCGAAADEQPPFWPWADGHHAFQ
CTGCGCCTGCTGTCGGCCACCCATG...
CTGCGCCTGCTGTCGGCCACCCATGCATGCATGGCCTCTCTCCTTTTCTCTCGTCTCATCGTCTGTGATGTGGTGGTGGTGCCGCCGTGCCGGTGCCGGTGCCATGCAGCATGATTAACCACTCGATCTACCAATAATCACCGGTCCCGTCGATCCTGTCCATCGCGTGCAGATCATGGCGCTCAAGGGAGGCGGAGGAGGGAGGCAGGAGGCGGCGTCGGAGCTCATCAACCTCAACGTCAAGGAGACGGAGGCGTCCTGCAGCAACCGCAGCAGCGACGAGAACAGCTCCGAGATCAACCTCGACATCTCCAGGCCGCCTCGGGCCGCCGACGAGAGCCCCGCCGCCATGGACAGCTACCGCGGCATCCCGTTCTACGCCTGCGCCCGCGCCGACGACGTCGACCAGCTCCAGCTCCTGCACAGCGGCGGCCACCCGTCCCCGGCGCCCAAGATGGAGCCCGGCCACGGCGCCGCCGCTACTGCGGGCGGTGGCGGAGGCGGAGGCGGCACCTTTGGAAGCCTGCTGTGCGGTGCCGCCGCCGACGAGCAGCCTCCGTTCTGGCCGTGGGCCGACGGCCACCACGCCTTCCAGTGAACAAATTAATCCTTCAATTCGTCTCGTACGGTGCACTACGCTGCCTGCTATGACCTCGCATCGGGCGACGCAGATTTTGTTCCATGGATCCAACAGCACGTCGACCGACCGACATGCCTCTCCGGCCGGTCATTTCCTCTTGGCATCGCATCAAGCTATGCGCCAGATCGCGAGATCGCCGCCGACGACGTACGTTGCCGATGCGTTGTTGATCAAAGAAGCAGCTGGGATATGTGAGGTGGTGAGACGATCCAATCAGGACGTACGGAGATGATGGATATGTCAGTCAAGGTAGATTGAGGAGTTGAGCAGTAAGTCTCTCTCTGTCTTTTTCTATTATCTCCATCCTTCTTGCCTTCTTCTTGGACATCTGTTTAACTATCTTCGTTCTCGAATATTTGTCGTTCTAGTTCAGTTTTGAACTAAAACACGACAAATAAAAAAGAACGAATGAAGTATATTATATATAGGTGATTACATTTGTGAGGCAGTGGTGATATTGTTGTGTATAGGATTATACTATATAATATGGTTATGGTACCATGTGAGTGCCAGGTTATTTCGTCCGCACTTGAACCTTGCAAATTCTACCTCTTATTTTTCTGCTTTTCTTTTACTCGT
MKPMATNGMAPSFFAANFLLQMQQEQQAHHQHQHHEGHDHLLAPPPPALVSPFLHDFGGAMTAPPPPMLATGIKRMYPDG
MCDDGSGHLHAEPKQHQQDCGGGASDDEEGSAAAACGERKRRLSVEQVRTLERSFEVANKLEPERKAQLARALGLQPRQV
AIWFQNRRARWKTKQLEKDYDALRRQLDAARAENDALLSHNKKLQTEIMALKGGGGGRQEAASELINLNVKETEASCSNR
SSDENSSEINLDISRPPRAADESPAAMDSYRGIPFYACARADDVDQLQLLHSGGHPSPAPKMEPGHGAAATAGGGGGGGG
TFGSLLCGAAADEQPPFWPWADGHHAFQ
CCAGCTCTGCCTCTCTGTCACACAC...
CCAGCTCTGCCTCTCTGTCACACACACACAAGACTCTCGCTAGCTCCCAAGTCCCAACCAACCTCTAGCAGCTCCATCCCCTCTCTCTCTCTTTCCCCGTGTCAATCTGTGGTGTGGGAAGGAAGATCGATATACTCCCTCCCCATGTTCCTCTCGCTCCTGCGATGAAGCCAATGGCAACCAATGGCATGGCCCCCTCCTTCTTCGCCGCCAACTTCCTCCTCCAAATGCAGCAGGAGCAGCAGGCGCACCACCAGCACCAGCACCATGAGGGCCACGACCACCTCCTGGCTCCCCCTCCCCCGGCGCTCGTCAGCCCCTTCCTCCACGACTTCGGCGGCGCCATGACCGCGCCGCCGCCTCCAATGCTGGCCACCGGCATTAAGCGCATGTACCCTGACGGCATGTGTGACGACGGCAGCGGCCACCTGCACGCGGAGCCCAAGCAGCACCAGCAGGACTGCGGCGGCGGCGCGTCGGACGACGAGGAGGGGTCCGCCGCGGCGGCGTGCGGCGAGCGGAAGCGGCGGCTGAGCGTGGAGCAGGTGCGCACGCTGGAGCGCAGCTTCGAGGTGGCCAACAAGCTGGAGCCGGAGCGCAAGGCGCAGCTGGCCCGCGCGCTGGGGCTGCAGCCCCGCCAGGTGGCCATCTGGTTCCAGAACCGCCGCGCCCGGTGGAAGACCAAGCAGCTGGAGAAGGACTACGACGCGCTGCGCCGCCAGCTGGACGCCGCCCGCGCCGAGAACGACGCCCTCCTCTCCCACAACAAGAAGCTCCAGACAGAGATCATGGCGCTCAAGGGAGGCGGAGGAGGGAGGCAGGAGGCGGCGTCGGAGCTCATCAACCTCAACGTCAAGGAGACGGAGGCGTCCTGCAGCAACCGCAGCAGCGACGAGAACAGCTCCGAGATCAACCTCGACATCTCCAGGCCGCCTCGGGCCGCCGACGAGAGCCCCGCCGCCATGGACAGCTACCGCGGCATCCCGTTCTACGCCTGCGCCCGCGCCGACGACGTCGACCAGCTCCAGCTCCTGCACAGCGGCGGCCACCCGTCCCCGGCGCCCAAGATGGAGCCCGGCCACGGCGCCGCCGCTACTGCGGGCGGTGGCGGAGGCGGAGGCGGCACCTTTGGAAGCCTGCTGTGCGGTGCCGCCGCCGACGAGCAGCCTCCGTTCTGGCCGTGGGCCGACGGCCACCACGCCTTCCAGTGAACAAATTAATCCTTCAATTCGTCTCGTACGGTGCACTACGCTGCCTGCTATGACCTCGCATCGGGCGACGCAGATTTTGTTCCATGGATCCAACAGCACGTCGACCGACCGACATGCCTCTCCGGCCGGTCATTTCCTCTTGGCATCGCATCAAGCTATGCGCCAGATCGCGAGATCGCCGCCGACGACGTACGTTGCCGATGCGTTGTTGATCAAAGAAGCAGCTGGGATATGTGAGGTGGTGAGACGATCCAATCAGGACGTACGGAGATGATGGATATGTCAGTCAAGGTAGATTGAGGAGTTGAGCAGTAAGTCTCTCTCTGTCTTTTTCTATTATCTCCATCCTTCTTGCCTTCTTCTTGGACATCTGTTTAACTATCTTCGTTCTCGAATATTTGTCGTTCTAGTTCAGTTTTGAACTAAAACACGACAAATAAAAAAGAACGAATGAAGTATATTATATATAGGTGATTACATTTGTGAGGCAGTGGTGATATTGTTGTGTATAGGATTATACTATATAATATGGTTATGGTACCATGTGAGTGCCAGGTTATTTCGTCCGCACTTGAACCTTG
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